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Sackler School of Graduate Biomedical Sciences

Student Publications

Publication in peer-reviewed journals is a very important part of graduate training. Recent publications by our students are listed below. The names of student authors are in bold font and their graduate program is listed.

2018

Fiaturi N, Russo JW, Nielsen HC, Castellot JJ Jr. 2017. CCN5 in alveolar epithelial proliferation and differentiation during neonatal lung oxygen injury. J Cell Commun Signal. 12: 217-229. (Najla Fiaturi - PPET)  Abstract

McGuire CM, Forgac M. 2018. Glucose starvation increases V-ATPase assembly and activity in mammalian cells through AMP kinase and phosphatidylinositide 3-kinase/Akt signaling. J Biol. Chem. Epub ahead of print. (Christina McGuire - Biochemistry)  Abstract

Sharma S, Munger K. 2018. Expression of the cervical carcinoma expressed PCNA regulatory (CCEPR) long noncoding RNA is driven by the human papillomavirus E6 protein and modulates cell proliferation independent of PCNA. Virology 518: 8-13. (Surendra Sharma - Biochemistry) Abstract

Tabtieng T, Degterev A, Gaglia MM. 2018. Caspase-dependent suppression of type I interferon signaling promotes Kaposi's sarcoma-associated herpesvirus lytic replication. J Virol. 92: e00078-18. (Tate Tabtieng - Biochemistry)  Abstract

2017

Cao L, Greenblatt DJ, Kwara A. 2017. Inhibitory effects of selected antituberculosis drugs on common human hepatic cytochrome P450 and UDP-glucuronosyltransferase enzymes. Drug Metab Dispos. Epub ahead of print. (Lei Cao - PPET) Abstract

Cao L, Kwara A, Greenblatt DJ. 2017. Metabolic interactions between acetaminophen (paracetamol) and two flavonoids, luteolin and quercetin, through in-vitro inhibition studies. J Pharm Pharmacol. Epub ahead of print. (Lei Cao - PPET) Abstract 

Du C, Collins W, Cantley W, Sood D, Kaplan DL. 2017. Tutorials for electrophysiological recordings in tissue engineering. ACS Biomater Sci Eng.  3: 2235-2246. (Will Collins - PPET) Abstract

Kulkarni S, Goel S, Sengupta S, Cochran BH. 2017. A large-scale RNAi screen identifies SGK1 as a key survival kinase for GBM stem cells. Mol Cancer Res. Epub ahead of print. (Shreya Kulkarni, Senjuti Sengputa - CMP) Abstract

McGuire C, Stransky L, Cotter K, Forgac M. 2017. Regulation of V-ATPase activity. Front Biosci. 22:609-622. (Christina McGuire - Biochemistry; Laura Stransky, Kristina Cotter - CMP) Abstract

Nwankwo JO, Gremmel T, Gerrits AJ, Mithila FJ, Warburton RR, Hill NS, Lu Y, Richey LJ, Jakubowski JA, Frelinger AL 3rd, Chishti AH. 2017. Calpain-1 regulates platelet function in a humanized mouse model of sickle cell disease. Thromb Res. 160: 58-65. (Jennifer Nwankwo - PPET) Abstract

Patel AB, Tsilioni I, Weng Z, Theoharides TC. 2017. TNF stimulates IL-6, CXCL8 and VEGF secretion from human keratinocytes via activation of mTOR, inhibited by tetramethoxyluteolin. Exp Dermatol. 27: 135-143. (Arti Patel - Biochemistry) Abstract 

Patel AB, Theoharides TC. 2017. Methoxyluteolin inhibits neuropeptide-stimulated proinflammatory mediator release via mTOR activation from human mast cells. J Pharmacol Exp Ther. 361: 462-471. (Arti Patel - Biochemistry) Abstract 

Saleh D, Najjar M, Zelic M, Shah S, Nogusa S, Polykratis A, Paczosa MK, Gough PJ, Bertin J, Whalen M, Fitzgerald KA, Slavov N, Pasparakis M, Balachandran S, Kelliher M, Mecsas J, Degterev A. 2017. Kinase activities of RIPK1 and RIPK3 can direct IFN-β synthesis induced by lipopolysaccharide. J Immunol. 198: 4435-4447. (Malek Najjar - PPET) Abstract 

Sherry-Lynes MM, Sengupta S, Kulkarni S, Cochran BH. 2017. Regulation of the JMJD3 (KDM6B) histone demethylase in glioblastoma stem cells by STAT3. PLoS One 12: e0174775. (Maureen Sherry-Lynes, Senjuti Sengupta, Shreya Kulkarni - CMP) Abstract

Taracanova A, Alevizos M, Karagkouni A, Weng Z, Norwitz E, Conti P, Leeman SE, Theoharides TC. 2017. SP and IL-33 together markedly enhance TNF synthesis and secretion from human mast cells mediated by the interaction of their receptors. Proc Natl Acad Sci USA 14: E4002-E4009. (Alexandra Taracanova - PPET) Abstract

Yu W, Goncalves KA, Li S, Kishikawa H, Sun G, Yang H, Vanli N, Wu Y, Jiang Y, Hu MG, Friedel RH, Hu GF. 2017. Plexin-B2 mediates physiologic and pathologic functions of angiogenin. Cell 171: 849-864. (Kevin Goncalves - CMP; Nil Vanli - Biochemistry) Abstract

2016

Coppage AL, Heard KR, DiMare MT, Liu Y, Wu W, Lai JH, Bachovchin WW. 2016. Human FGF-21 Is a substrate of fibroblast activation protein. PLoS One 11(3): e0151269. (Andrew Coppage - Biochemistry)   Abstract  

Cotter K, Liberman R, Sun-Wada G, Wada Y, Sgroi D, Naber S, Brown D, Breton S, Forgac M. 2016. The a3 isoform of subunit a of the vacuolar ATPase localizes to the plasma membrane of invasive breast tumor cells and is overexpressed in human breast cancer. Oncotarget. 7(29): 46142-46157. (Kristina Cotter and Rachel Liberman - CMP)  Abstract

Denis D, Rouleau C, Schaffhausen BS. 2016. A transformation-defective polyomavirus middle T antigen with a novel defect in PI3 kinase signaling. J Virol. 91(2). pii: e01774-16. (Deborah Denis and Cecile Rouleau - Biochemistry) Abstract 

Goncalves KA, Silberstein L, Li S, Severe N, Hu MG, Yang H, Scadden DT, Hu GF. 2016. Angiogenin promotes hematopoietic regeneration by dichotomously regulating quiescence of stem and progenitor cells. Cell 166(4): 894-906. (Kevin Goncalves - CMP) Abstract

Gu S, Chan WW, Mohi G, Rosenbaum J, Sayad A, Lu Z, Virtanen C, Li S, Neel BG, Van Etten RA. 2016. Distinct GAB2 signaling pathways are essential for myeloid and lymphoid transformation and leukemogenesis by BCR-ABL1. Blood 127(14): 1803-1813. (Wayne Chan - CMP)  Abstract

Julian B, Gao K, Harwood BN, Beinborn M, Kopin AS. 2016. Mutation-induced functional alterations of CCR6. J Pharmacol Exp Ther. 360: 106-116. (Bina Julian - PPET)  Abstract

Kotewicz KM, Ramabhadran V, Sjoblom N, Vogel JP, Haenssler E, Zhang M, Behringer J, Scheck RA, Isberg RR. 2016. A single Legionella effector catalyzes a multistep ubiquitination pathway to rearrange tubular endoplasmic reticulum for replication. Cell Host Microbe. 21(2): 169-181. (Nicole Sjoblom - Biochemistry) Abstract 

Lu Y, Hanada T, Fujiwara Y, Nwankwo JO, Wieschhaus AJ, Hartwig J, Huang S, Han J, Chishti AH. 2016. Gene disruption of dematin causes precipitous loss of erythrocyte membrane stability and severe hemolytic anemia. Blood. 128: 93-103. (Jennifer Nwankwo - PPET)  Abstract 

Metrick CM, Heldwein EE. 2016. The novel structure and unexpected RNA-binding ability of the C-terminal domain of HSV-1 tegument protein UL21. J Virol. 90(12): 5759-5769.  Abstract (Claire Metrick - Biochemistry)

McGuire C, Cotter K, Stransky L, Forgac M. 2016. Regulation of V-ATPase assembly and function of V-ATPases in tumor cell invasiveness. Biochim Biophys Acta. 1857(8): 1213-1218.  Abstract  (Christina McGuire - Biochemistry; Kristina Cotter and Laura Stransky - CMP)

Najjar M*, Saleh D*, Zelic M, Nogusa S, Shah A, Tai A, Finger JN, Polykratis A, Gough PJ, Bertin J, Whalen M, Pasparakis, Balachandran S, Kelliher M, Poltorak A, Degterev A. 2016. RIPK1 and RIPK3 kinases promote cell death-independent inflammation by TLR4-TRIF Immunity. 45: 46-59. * equal contribution. (Malek Najjar - PPET) Abstract 

Nwankwo JO, Lei J, Xu J, Rivera A, Gupta K, Chishti AH. 2016. Genetic inactivation of calpain-1 attenuates pain sensitivity in a humanized mouse model of sickle cell disease. Haematologica. 101: e397-e400. (Jennifer Nwankwo - PPET)  Abstract 

Patel AB, Tsilioni I, Leeman SE, Theoharides TC. 2016. Neurotensin stimulates sortilin and mTOR in human microglia inhibitable by methoxyluteolin, a potential therapeutic target for autism. Proc Natl Acad Sci USA. pii: 201604992. (Arti Patel - Biochemistry)  Abstract 

Rogalin HB, Heldwein EE. 2016. Characterization of VSV pseudotypes bearing essential entry glycoproteins gB, gD, gH, and gL of Herpes Simplex virus Type 1. J Virol. 90(22): 10321-10328. (Henry Rogalin - Biochemistry) Abstract

Rouleau C, Pores Fernando AT, Hwang JH, Faure N, Jiang T, White EA, Roberts TM, Schaffhausen BS. 2016. Transformation by Polyomavirus middle T antigen involve a unique bimodal interaction with the Hippo effector YAP. J Virol. 90: 7032-7045. (Cecile Rouleau - Biochemistry) Abstract 

Shearer AM, Rana R, Austin K, Baleja JD, Nguyen N, Bohm A, Covic L, Kuliopulos A. 2016. Targeting liver fibrosis with a cell-penetrating PAR2 pepducin. J Biol Chem. 291: 23188-23198. (Andrew Shearer - Biochemistry) Abstract 

Sheets AR, Demidova-Rice TN, Shi L, Ronfard V, Grover KV, Herman IM. 2016. Identification and characterization of novel matrix-derived bioactive peptides: A role for collagenase from Santyl® ointment in post-debridement wound healing? PLoS One 11: e0159598. (Anthony Sheets - CMP) Abstract

Sheets AR, Durham JT, Herman IM. 2016. Quantitative imaging-based examination of pericytes controlling endothelial growth dynamics and angiogenesis. Methods Mol Biol. 1430: 221-229. (Anthony Sheets - CMP) Abstract

Sheets AR, Massey CJ, Cronk SM, Iafrati MD, Herman IM. 2016. Matrix- and plasma-derived peptides promote tissue-specific injury responses and wound healing in diabetic swine. J Transl Med. 14(1): 197. Anthony Sheets - CMP) Abstract

Schiemer J, Bohm A, Lin L, Merrill-Skoloff G, Flaumenhaft R, Huang JS, Le Breton GC, Chishti AH. 2016. Gα13 switch region 2 relieves talin autoinhibition to activate IαIbβ3 integrin. J Biol Chem. 291(52): 26598-26612. (James Schiemer - CMP)  Abstract

Silberstein L, Goncalves KA, Kharchenko PV, Turcotte R, Kfoury Y, Mercier F, Baryawno N, Severe N, Bachand J, Spencer JA, Papazian A, Lee D, Chitteti BR, Srour EF, Hoggatt J, Tate T, Lo Celso C, Ono N, Nutt S, Heino J, Sipilä K, Shioda T, Osawa M, Lin CP, Hu GF, Scadden DT. 2016. Cell Stem Cell. 19: 530-543. (Kevin Goncalves - CMP) Abstract

Stransky L, Cotter K, Forgac M. 2016. The Function of V-ATPases in cancer. Physiol Rev. 96(3): 1071-1091. (Laura Stransky and Kristina Cotter - CMP) Abstract

Szabo R, Lantsman T, Peters DE, Bugge TH. 2016. Delineation of proteolytic and non-proteolytic functions of membrane-anchored serine protease Prss8/prostasin. Development 143: 2818-2828. (Diane Peters - PPET) Abstract

Theoharides TC, Stewart JM, Taracanova A, Conti P, Zouboulis CC. 2016. Neuroendocrinology of the skin. Rev Endocr Meab Disorders. 17: 287-294. (Alexandra Taracanova - PPET)Abstract 

Theoharides TC, Tsilioni I, Patel AB, Doyle R. 2016. Atopic diseases and inflammation of the brain in the pathogenesis of autism spectrum disorders. Transl Psychiatry. 6: e844. (Arti Patel - Biochemistry) Abstract 

Weng Z, Zhang B, Tsilioni I, Theoharides TC. 2016. Nanotube formation: A rapid form of "alarm signaling"? Clin Ther. 38: 1066-1072. (Katie Weng - PPET) Abstract

Yang E, Cisowski J, Nguyen N, O'Callaghan K, Xu J, Agarwal A, Kuliopulos A, Covic L. 2016. Dysregulated protease activated receptor 1 (PAR1) promotes metastatic phenotype in breast cancer through HMGA2. Oncogene 35: 1529-40. (Eric Yang - Biochemistry) Abstract 

Wong DS, Jay DG. 2016. Emerging roles of extracellular Hsp90 in cancer. Adv Cancer Res. 129: 141-163. (Daniel Wong - CMP) Abstract

Wong R, Feig LA. 2016. Tyrosine phosphorylation of RalGDS by c-Met receptor blocks its interaction with Ras. Biochem Biophys Res Commun. 480(3): 468-473. (Richard Wong - Biochemistry)  Abstract